Job Description P39362 Confidence 91.98% Date Thu Jan 5 11:59:53 GMT 2012 Rank 399 Aligned Residues 177 % Identity 10% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.													.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	.	.	H	L	D	I	E	D	S	S	F	I	N	N	.	.	.	.	.	.	.	.	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	.	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F
Query Conservation																								.	.													.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.																	.															.
Template Conservation																																																																																.
Template Sequence		D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	.	A
Template Known Secondary structure		T	T																T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G											T	T						B			S				.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	.	.	.	.	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M
Query Conservation																																																						.	.	.	.
Alig confidence																								.																														.	.	.	.											.
Template Conservation																								.																																												.
Template Sequence		D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	.	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	.	C	V	A	K	Y	P	A	P	P	E	Y	S	N
Template Known Secondary structure						T	T			S						G	G	G	T	T				.							T	T		S							T	T															T	T	T									.			S	S	S	S			G	G	G
Template Predicted Secondary structure																								.																																												.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	.	.	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	T	E	A	P	C	A	A	V	R	L	G	A	K	L	I
Template Known Secondary structure		T	T									S	T	T	S									S	S	S	S									T	T		S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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