Job Description P39362 Confidence 96.77% Date Thu Jan 5 11:59:53 GMT 2012 Rank 276 Aligned Residues 172 % Identity 14% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																				.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	.	.	.	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	.	H	P	L	S	F	H	F	M	L	A	R	.	.	.	.	.	.	.	.	.	.	.	P	Q	R	W	F	N	A	L	A	E	I	R
Query Conservation																				.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																									.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V	D	K	S	A	E	N	G
Template Known Secondary structure		G	G						T	S			S							T	T								T	S																T	T	S								G	G	G	T	T	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.
Predicted Secondary structure								.	.																										.	.	.	.																																								.
Query SS confidence								.	.																										.	.	.	.																																								.
Query Sequence		P	A	W	I	F	V	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	.	.	.	.	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	.	E	K	I
Query Conservation								.	.																										.	.	.	.																																								.
Alig confidence								.	.																										.	.	.	.																																								.
Template Conservation
Template Sequence		M	D	V	F	R	V	F	D	A	M	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	K	D	M	A	A	L	L	K	P	Q	P	A	Y	D	I	I
Template Known Secondary structure										T	T			T													T	T													T	T																T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.		.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure										.							.	.	.	.
Query SS confidence										.							.	.	.	.
Query Sequence		Q	K	V	R	T	A	F	P	.	Q	T	E	C	W	A	.	.	.	.	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M
Query Conservation										.							.	.	.	.
Alig confidence										.							.	.	.	.
Template Conservation
Template Sequence		K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V
Template Known Secondary structure										T	T								B		T	T	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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