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Job DescriptionP39362
Confidence97.95%DateThu Jan 5 11:59:53 GMT 2012
Rank218Aligned Residues178
% Identity13%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40....... ..50.........60.........70 .........80..
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Query Sequence  NPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGM. . . . . . KTVQAVARQTPHPLSFHFMLARP. . QRWFNALAEIRP
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Template Sequence  TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGA
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TT
SS
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BTTTB

SS
TT
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BTTB
T
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   83.... ..90.........100.........110... ......120.........130........ .140.........150.......
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Query Sequence  AWIFV. . HAETLDYPSETLTEIRHTGARAGLVF. . NPATPIDAWRYLASELDGVMVMTSE. PDGQGQRFIPSMCEKIQKV
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Template Sequence  RVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAF
Template Known Secondary structure 
TT
GGGGTT
TGGGS
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   158.160. ....... .170.........180........
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Query Sequence  RTAF. PQTECWA. . . . DGGITLAAAQQLAAAGAQHM
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Template Sequence  KAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRV
Template Known Secondary structure  S
TTS
B
TTS
TT

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   188.190.........200.........210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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