Job Description P39362 Confidence 93.06% Date Thu Jan 5 11:59:53 GMT 2012 Rank 375 Aligned Residues 196 % Identity 14% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.										.	.	.																													.	.	.	.
Query SS confidence																												.	.										.	.	.																													.	.	.	.
Query Sequence		A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	.	.	I	E	D	S	S	F	I	N	N	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	.	.	.	.	Q	R	W	F	N	A	L	A
Query Conservation																												.	.										.	.	.																													.	.	.	.
Alig confidence																												.	.										.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	G	Y	S	P	E	E	F	E	K	L	A	Y	D	L	L	S	N	G	A	D	Y	M	K	D	D	E	N	L	T	S	P	W	Y	N	R	F	E	E	R	A	E	I	M	A	K	I	I	D	K	V	E	N	E	T	G	E	K	K	T	W	F	A	N	I	T	A	D	L	L	E	M	E	Q	R	L	E	V	L	A
Template Known Secondary structure		S	S																T	T								T	T					T	T	S																				T		S							B			S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure											.	.																																		.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence											.	.																																		.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		E	I	R	P	A	W	I	F	V	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	.	.	.	.	.	.	.	.	.	.	A	W	R	Y	L	A	S	.	.	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q
Query Conservation											.	.																																		.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence											.	.																																		.	.	.	.	.	.	.	.	.	.								.	.															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	F	V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G	T	A	E	G	G	K	.	.	.
Template Known Secondary structure				T																										T	T								T	T	T					S		T	T	S															T		S									T			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.		200	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Query Sequence		R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	.	A	A	G	A	Q	H	M	V	I	G	.	R	A	L	F	S	S	S	D	.	Y	R	A	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Alig confidence		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Template Conservation		.	.	.
Template Sequence		.	.	.	W	D	V	I	Q	N	A	R	I	L	R	E	S	H	Y	K	P	D	E	N	D	V	F	H	L	E	Q	K	F	Y	S	I	K	A	A	F	P	T	S	S	G	G	L	H	P	G	N	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q	L	G	G	G	T	L	G	H	P	D	G	P	A	A	G
Template Known Secondary structure		.	.	.													S						T	T			S							T	T										S	S			T	T	T								T		S	S	S					S					S		T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		204	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	V	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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