Job Description P39362 Confidence 93.98% Date Thu Jan 5 11:59:53 GMT 2012 Rank 354 Aligned Residues 199 % Identity 15% Template c1bwvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.													.	.	.																											.	.	.	.	.
Query SS confidence																									.	.	.													.	.	.																											.	.	.	.	.
Query Sequence		A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	.	.	.	H	L	D	I	E	D	S	S	F	I	N	N	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	.	.	.	.	.	R	P	Q	R	W	F	N	A
Query Conservation																									.	.	.													.	.	.																											.	.	.	.	.
Alig confidence																									.	.	.		.	.										.	.	.																											.	.	.	.	.
Template Conservation																													.	.
Template Sequence		L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	D	E	N	.	.	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F
Template Known Secondary structure		S																		T		S	B				T	T	.	.		S	S	B	T	T	B																					T	S			B								S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	.	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	.	.	.	.	.	.	.	.	.	.	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R
Query Conservation																	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																														.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																													.
Template Sequence		A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	.	G	K	L	E
Template Known Secondary structure					T	T		S						G	G	G															T	T								T	T	T					S		T	T	S															T		S							S	S	.	S	S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160																				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.		200	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.									.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.									.
Query Sequence		F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	.	A	A	G	A	Q	H	M	V	I	G	.	R	A	L	F	S	S	S	D	.	Y	R	A	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.									.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.									.
Template Conservation
Template Sequence		G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	D	G	I	Q	A	G
Template Known Secondary structure																	S					B	T	T	T	T	B		S					T	T										S	S			T	T	S										S	S						S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		204	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	A	N	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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