Job Description P33371 Confidence 90.17% Date Thu Jan 5 11:52:10 GMT 2012 Rank 497 Aligned Residues 146 % Identity 18% Template d5ruba1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.70

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		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																			.				.	.	.	.	.	.
Template Conservation																																		.				.	.	.	.	.	.
Template Sequence		D	G	G	L	V	V	G	T	I	I	K	P	K	L	G	L	R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	.	D	F	I	.	.	.	.	.	.	K	N	D	E	P	Q	G	N	Q	P	F	A	P	L	R	D	T	I	A	L	V	A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F
Template Known Secondary structure		S										S	S	S	S															T	T	T		.	S			.	.	.	.	.	.				T	T		S		B	T	T	B																					S	S
Template Predicted Secondary structure																																		.				.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																															.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																															.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	.	.	.	.	.	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	.	N	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.																															.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																					.	.	.	.	.					.	.	.	.	.	.	.	.	.																		.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		S	A	N	I	T	.	.	A	D	D	P	F	E	I	I	A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	.	.	.	.	.	.	.	.	.	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P
Template Known Secondary structure							.	.		S	S																G	G	G	G	G	G						.	.	.	.	.	.	.	.	.		T	T	T	S													T	T	S							T	T	T					S	T
Template Predicted Secondary structure							.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.										.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H	T	G
Template Known Secondary structure		T			S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions