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Job DescriptionP33371
Confidence100.00%DateThu Jan 5 11:52:10 GMT 2012
Rank12Aligned Residues239
% Identity20%Templated1vyra_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution0.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2....... 10.........20.........30.........40.... .....50...... ...60......
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Query Sequence  RVLLAPME. . . . . . . . GVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK. . . . . VFHRICPELQNA. . SRTPSGTLVR
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Template Sequence  RVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIA
Template Known Secondary structure  S







BTTTTB

TTTSSSSSTT

STT

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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   67..70.. .......80.........90..
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Query Sequence  VQLLGQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPQWLAENAARAVELGSWGV
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Template Sequence  VQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFDLV
Template Known Secondary structure 

TTSS
GGGSGGG


SSS



S
TTS






GGGTT
S
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   93.... ..100.........110.........120.........130.........140. ........150....
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Query Sequence  DLNCG. . . . . . . . . CPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVR. . . . . . . . . LGWDSGEKKFEIA
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Template Sequence  ELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADR. IGIRVSPIGTFQNVDNGPNEEADALYLI
Template Known Secondary structure 
TTS
TTT



STTSSSTS
GGG.

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   179180.........190.........200.........210.........220......... 230.........240.........250.......
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  DAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLS
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Template Sequence  EELAKRGIAYLHMSETD. . . LAGGKPYSEAFRQKVRERFHGVIIGAG. AYTAEKAEDLIGKGLIDAVAFGRDYIANPDLV
Template Known Secondary structure  TT
S

B...TTB






SS.S

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   258.260.........270.... .....280.........290.........300. ........310.........320.........330...
 
   235....240.....
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Query Sequence  RVVKYNEPRMP
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Template Sequence  ARLQKKAELNP
Template Known Secondary structure  T




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   334.....340....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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