Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 12 Aligned Residues 239 % Identity 20% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		2	.	.	.	.	.	.	.									10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																																				.	.	.	.	.													.	.
Query SS confidence										.	.	.	.	.	.	.	.																																				.	.	.	.	.													.	.
Query Sequence		R	V	L	L	A	P	M	E	.	.	.	.	.	.	.	.	G	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	.	.	.	.	.	V	F	H	R	I	C	P	E	L	Q	N	A	.	.	S	R	T	P	S	G	T	L	V	R
Query Conservation										.	.	.	.	.	.	.	.																																				.	.	.	.	.													.	.
Alig confidence										.	.	.	.	.	.	.	.																																				.	.	.	.	.													.	.
Template Conservation
Template Sequence		R	V	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	G	E	Y	Y	R	Q	R	A	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	L	H	S	P	E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	D	G	R	I	A
Template Known Secondary structure		S												B	T	T	T	T	B												T	T	T	S	S									S	S	S	T	T			S	T	T			B	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		67	.	.	70	.	.																																																							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	L	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	L	W	H	T	G	R	I	S	H	S	S	I	Q	P	G	G	Q	A	P	V	S	A	S	A	L	N	A	N	T	R	T	S	L	R	D	E	N	G	N	A	I	R	V	D	T	T	T	P	R	A	L	E	L	D	E	I	P	G	I	V	N	D	F	R	Q	A	V	A	N	A	R	E	A	G	F	D	L	V
Template Known Secondary structure								T	T	S	S		G	G	G	S	G	G	G						S	S	S					S							T	T	S															G	G	G																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		93	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.
Query Sequence		D	L	N	C	G	.	.	.	.	.	.	.	.	.	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	.	.	.	.	.	.	.	.	.	L	G	W	D	S	G	E	K	K	F	E	I	A
Query Conservation							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																																						.							.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	Q	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S	A	D	R	.	I	G	I	R	V	S	P	I	G	T	F	Q	N	V	D	N	G	P	N	E	E	A	D	A	L	Y	L	I
Template Known Secondary structure							T	T	S								T	T	T					S	T	T	S	S	S					T														S		G	G	G	.								S	S		B	T	T	B				T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S
Query Conservation
Alig confidence																			.	.	.																												.
Template Conservation																			.	.	.																												.
Template Sequence		E	E	L	A	K	R	G	I	A	Y	L	H	M	S	E	T	D	.	.	.	L	A	G	G	K	P	Y	S	E	A	F	R	Q	K	V	R	E	R	F	H	G	V	I	I	G	A	G	.	A	Y	T	A	E	K	A	E	D	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	Y	I	A	N	P	D	L	V
Template Known Secondary structure							T	T		S								B	.	.	.	T	T	B																		S						S	.	S												T	T	S		S					S							T	T
Template Predicted Secondary structure																			.	.	.																												.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		235	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	K	Y	N	E	P	R	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	Q	K	K	A	E	L	N	P
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions