Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 1 Aligned Residues 298 % Identity 27% Template d1vhna_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.59

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	L	L	A	P	M	E	G	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	L	G	Q	F	P	Q	W	L	A	E	N
Query Conservation
Alig confidence																										.																										.	.	.	.	.	.	.
Template Conservation																										.																										.	.	.	.	.	.	.
Template Sequence		V	K	V	G	L	A	P	X	A	G	Y	T	D	S	A	F	R	T	L	A	F	E	W	G	.	A	D	F	A	F	S	E	X	V	S	A	K	G	F	L	X	N	S	Q	K	T	E	E	L	L	.	.	.	.	.	.	.	P	Q	P	H	E	R	N	V	A	V	Q	I	F	G	S	E	P	N	E	L	S	E	A
Template Known Secondary structure										T	T	T		S									T	T	T	.							S									T	T								S	.	.	.	.	.	.	.			T	T		T	T								S
Template Predicted Secondary structure																										.																										.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A
Query Conservation
Alig confidence								.																																												.	.													.
Template Conservation								.																																												.	.													.
Template Sequence		A	R	I	L	S	E	.	K	Y	K	W	I	D	L	N	A	G	C	P	V	R	K	V	V	K	E	G	A	G	G	A	L	L	K	D	L	R	H	F	R	Y	I	V	R	E	L	R	K	S	V	.	.	S	G	K	F	S	V	K	T	R	L	G	W	.	E	K	N	E	V	E	E	I	Y	R	I	L	V	E	E
Template Known Secondary structure						T	T	.	T		S																T	T		G	G	G	G	G	S																	.	.	S	S								S		S	.	S	S													T
Template Predicted Secondary structure								.																																												.	.													.
Template SS confidence
		77	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	R	V	V	K	Y	.
Query Conservation																																																																																	.
Alig confidence																					.												.	.																																															.
Template Conservation																					.												.	.
Template Sequence		G	V	D	E	V	F	I	H	T	R	T	V	V	Q	S	F	T	G	R	.	A	E	W	K	A	L	S	V	L	E	K	.	.	R	I	P	T	F	V	S	G	D	I	F	T	P	E	D	A	K	R	A	L	E	E	S	G	C	D	G	L	L	V	A	R	G	A	I	G	R	P	W	I	F	K	Q	I	K	D	F
Template Known Secondary structure		T								S	S		T	T	T	T	T	S	S		.			G	G	G	G	G	G	S			.	.	S	S						S	S			S														S					S	G	G	G	T	T		T	T
Template Predicted Secondary structure																					.												.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	N	E	P	R	M	P	W	P	E	V	V	A	L	L	Q	K	Y	T	R	L	E	K	Q	G	D	T	G	L	Y	H	V	A	R	I	K	Q	W	L	S	Y	L	R	K	E	Y	D	E	A	T	E	L	F	Q	H	V	R	V	L	N	N	S	P	D	I	A	R	A	I	Q	A	I	D	I	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	R	S	G	K	Y	S	E	P	S	R	E	E	I	L	R	T	F	E	R	H	L	E	L	L	I	K	T	K	G	E	R	K	A	V	V	E	X	R	K	F	L	A	G	Y	T	K	D	L	K	G	A	R	R	F	R	E	K	V	X	K	I	E	E	V	Q	I	L	K	E	X	F	Y	N	F	I	K	E
Template Known Secondary structure					S																																				T	T					T	T	T		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions