Job Description P33371 Confidence 90.34% Date Thu Jan 5 11:52:10 GMT 2012 Rank 493 Aligned Residues 130 % Identity 20% Template d1umya_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.5

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.
Predicted Secondary structure																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Query Sequence		A	P	M	E	G	V	L	D	S	L	V	R	E	L	L	T	E	V	.	.	.	.	.	.	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	.	.	.	.	.	.	.	.	L	G
Query Conservation																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	L	S	C	K	S	E	T	E	V	K	K	I	F	H	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	.	.	.	.	.	.	.	.	.	.	.	A	L	K	T	S	G	K	P	I	A	A	T	M	C	I	G	P	E	G	D	L	H	G
Template Known Secondary structure					T	T																				T	T		S								S											.	.	.	.	.	.	.	.	.	.	.				T	T		S										T	T			T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																													.	.	.															.	.	.	.
Query SS confidence																																																													.	.	.															.	.	.	.
Query Sequence		Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	.	.	.	P	A	H	L	P	V	S	V	K	V	R	L	G	W	.	.	.	.
Query Conservation																																																													.	.	.															.	.	.	.
Alig confidence															.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.															.	.	.	.
Template Conservation															.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	P	G	E	C	A	V	R	L	V	K	A	.	.	.	G	A	A	I	V	G	V	N	C	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	S	T	S	L	Q	T	I	K	L	M	K	E	G	L	E	A	A	R	L	K	A	Y	L	M	S	Q	P	L	A	Y	H	T	P	D	C
Template Known Secondary structure														T	.	.	.	T		S						S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	T											S	B			T	T
Template Predicted Secondary structure															.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.																	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
																					145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y	I
Template Known Secondary structure			S	S	T	G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions