Job Description P33371 Confidence 95.72% Date Thu Jan 5 11:52:10 GMT 2012 Rank 418 Aligned Residues 144 % Identity 15% Template d1svda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.80

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		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure												.	.	.	.																							.	.
Query SS confidence												.	.	.	.																							.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	.	.	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L
Query Conservation												.	.	.	.																							.	.
Alig confidence												.	.	.	.																							.	.											.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	M	.	.	.	.	.	.	.	.	R	W	R	D	R	F	L	F	V	Q	D	A	T	E	T	A	E	A	Q	T	G	E	R	K
Template Known Secondary structure			S	S								S		S	S	S																T	T		S						T	T		S	S	B	T	T	B	.	.	.	.	.	.	.	.																					S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	.	.	.	Q	R	L	N	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																										.	.	.	.	.	.	.	.	.															.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		G	H	Y	L	N	V	.	.	T	A	P	T	P	E	E	M	Y	K	R	A	E	F	A	K	E	I	G	A	P	I	I	M	H	.	.	.	.	.	.	.	.	.	D	Y	I	T	G	G	F	T	A	N	T	G	L	A	K	W	C	Q	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	N	P
Template Known Secondary structure								.	.			S	S															T							.	.	.	.	.	.	.	.	.		T	T	T	T																T								T	T						S		T
Template Predicted Secondary structure								.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		N	H	G	I	.	H	F	R	V	L	T	K	I	L	R	L	S	G	G	D	H	L	H	T	G
Template Known Secondary structure		T	S	S		.															S
Template Predicted Secondary structure						.
Template SS confidence
		299	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions