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Job DescriptionP33371
Confidence98.64%DateThu Jan 5 11:52:10 GMT 2012
Rank160Aligned Residues157
% Identity20%Templated1rpxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDL. . . . . NCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAH
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Template Sequence  SKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGP. . . . . . . . . . . . . . . . LVVDSLRPIT. . D
Template Known Secondary structure 
TTS
BGGGS
GGGTT


BSSSSS
B


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   7..10.........20.........30.........40.........50....... ..60....... .
 
   134.....140.........150.........160.........170..
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Query Sequence  LPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LPLDVHL. . MIVEP. . . DQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDL
Template Known Secondary structure  S
..SSS...TT
S
STTT
S
TTS
TT

GGGGTTTTTT
S
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   6970..... ....80 .........90.........100.........110.........120.........130.........140...
 
   173......180.........190.... .....200.........210.........220.........230.........
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Query Sequence  . . . . . . . . . EQGYRAEHIDWQAIGDIRQRLN. . . . IPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY
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Template Sequence  VLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIE. AGANALVAGSAVFGAPDYAEAIKG
Template Known Secondary structure  SS
TT
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TTT


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TTT.T

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   144.....150.........160.........170.........180.........190........ .200.........210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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