Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 19 Aligned Residues 243 % Identity 16% Template d1oyaa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		2	.	.	.	.	.	.	.									10	.	.			.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.				.	.												.																						.	.	.	.	.													.	.
Query SS confidence										.	.	.	.	.	.	.	.				.	.												.																						.	.	.	.	.													.	.
Query Sequence		R	V	L	L	A	P	M	E	.	.	.	.	.	.	.	.	G	V	L	.	.	D	S	L	V	R	E	L	L	T	E	V	.	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	.	.	.	.	.	V	F	H	R	I	C	P	E	L	Q	N	A	.	.	S	R	T	P	S	G	T
Query Conservation										.	.	.	.	.	.	.	.				.	.												.																						.	.	.	.	.													.	.
Alig confidence										.	.	.	.	.	.	.	.				.	.												.																						.	.	.	.	.													.	.
Template Conservation
Template Sequence		R	A	V	I	P	P	L	T	R	M	R	A	L	H	P	G	N	I	P	N	R	D	W	A	V	E	Y	Y	T	Q	R	A	Q	R	P	G	T	M	I	I	T	E	G	A	F	I	S	P	Q	A	G	G	Y	D	N	A	P	G	V	W	S	E	E	Q	M	V	E	W	T	K	I	F	N	A	I	H	E	K	K	S
Template Known Secondary structure		S			B									B	T	T	T	T	B			T	T	T									T		S	T	T										S	S	G	G	G				T	T	S		B	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.																																																			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	R	V	Q	L	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	W	V	Q	L	W	V	L	G	W	A	A	F	P	D	N	L	A	R	D	G	L	R	Y	D	S	A	S	D	N	V	F	M	D	A	E	Q	E	A	K	A	K	K	A	N	N	P	Q	H	S	L	T	K	D	E	I	K	Q	Y	I	K	E	Y	V	Q	A	A	K	N	S	I	A	A	G	A	D	G	V	E
Template Known Secondary structure											G	G	G	S								T	T						S		S	S			S											T	T																												T	T		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		94	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.												.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	C	G	C	.	.	.	.	.	.	.	.	.	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	L	.	.	.	.	.	.	.	.	.	.	.	G	W	D	S	G	E	K	K	F	E	I
Query Conservation							.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																																				.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.
Template Sequence		I	H	S	A	N	G	Y	L	L	N	Q	F	L	D	P	H	S	N	T	R	T	D	E	Y	G	G	S	I	E	N	R	A	R	F	T	L	E	V	V	D	A	L	V	E	A	I	G	H	E	.	K	V	G	L	R	L	S	P	Y	G	V	F	N	S	M	S	G	G	A	E	T	G	I	V	A	Q	Y	A	Y	V
Template Known Secondary structure						T	T	S								T	T	T					S	T	T	S	S	S					T																G	G	.	G							T	T			T	T	T			G	G	G	S	T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	.	.	.	.	.	.	.	.	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	E	L	E	K	R	A	K	A	G	K	R	L	A	F	V	H	L	V	E	P	R	V	T	N	P	F	L	T	E	G	E	G	E	Y	E	G	G	S	N	D	F	V	Y	S	I	W	K	G	P	V	I	R	A	G	N	F	A	L	H	P	E	V	V	R	E	E	V	K	D	K	R	T	L	I	G	Y	G	R
Template Known Secondary structure											T	T				S							T	T		S		T	T	S		T	T	S	S				S			T	T								S						S	S		T	T									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	N	I	P	N	L	S	R	V	V	K	Y	N	E	P	R	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	I	S	N	P	D	L	V	D	R	L	E	K	G	L	P	L	N	K
Template Known Secondary structure							T	T								T				B
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions