Return to main results Retrieve Phyre Job Id

Job DescriptionP33371
Confidence95.28%DateThu Jan 5 11:52:10 GMT 2012
Rank431Aligned Residues133
% Identity18%Templated1lt7a_
SCOP infoTIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  APMEGVLDSLVRELLTEV. . . . . . NDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFP. . . . .
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Template Sequence  SYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVE. . . . . . . . . . . TLIASGKPVAATMAIGPEGDLHG
Template Known Secondary structure  TT

TT
S


S
...........GGGSS


BTTBSTTS
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   75....80.........90.........100.........110.........120.........130 .........140....
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Query Sequence  QWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAV. . . PAHLPVSVKVRLGW. . . . . . .
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Template Sequence  VPPGEAAVRLVKAGASIIGVNCHF. . . . . . . . . . . . . . . . DPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQ
Template Known Secondary structure 

TT
SSSS................
TT




SB

TT

TT
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   196...200.........210......... 220.........230.........240.........250.........
 
   145....150.........160.....
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Query Sequence  . . . . . . . . . . . . . . . . DSGEKKFEIADAVQQAGATEL
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Template Conservation                                  
  

Template Sequence  GFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI
Template Known Secondary structure 
GGGSTTTTTS
GGGB

T

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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