Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 17 Aligned Residues 235 % Identity 17% Template d1icpa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		2	.	.	.	.	.	.	.	10	.								.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																			.	.	.	.	.												.	.
Query SS confidence												.	.	.	.	.	.	.																																			.	.	.	.	.												.	.
Query Sequence		R	V	L	L	A	P	M	E	G	V	.	.	.	.	.	.	.	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	.	.	.	.	.	F	H	R	I	C	P	E	L	Q	N	A	.	.	S	R	T	P	S	G	T	L	V	R	V
Query Conservation												.	.	.	.	.	.	.																																			.	.	.	.	.												.	.
Alig confidence												.	.	.	.	.	.	.																																			.	.	.	.	.												.	.
Template Conservation
Template Sequence		R	V	V	L	A	P	L	T	R	Q	R	S	Y	G	Y	I	P	Q	P	H	A	I	L	H	Y	S	Q	R	S	T	N	G	G	L	L	I	G	E	A	T	V	I	S	E	T	G	I	G	Y	K	D	V	P	G	I	W	T	K	E	Q	V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F	C
Template Known Secondary structure		S												G	G	G	S												T			T	T											S	G	G	G			S	T	T			B		S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.																																																			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	G	Q	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	W	H	V	G	R	V	S	N	K	D	F	Q	P	N	G	E	D	P	I	S	C	T	D	R	G	L	T	P	Q	I	M	S	N	G	I	D	I	A	H	F	T	R	P	R	R	L	T	T	D	E	I	P	Q	I	V	N	E	F	R	V	A	A	R	N	A	I	E	A	G	F	D	G	V	E	I	H	G	A
Template Known Secondary structure							T	T	S	S		T	T	T	S	G	G	G						S	S	S									T	T	S	S													T	T	T																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		98										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		C	.	.	.	.	.	.	.	.	.	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	.	.	.	.	.	.	.	.	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A
Query Conservation			.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																																				.								.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		H	G	Y	L	I	D	Q	F	M	K	D	Q	V	N	D	R	S	D	K	Y	G	G	S	L	E	N	R	C	R	F	A	L	E	I	V	E	A	V	A	N	E	I	G	S	D	.	R	V	G	I	R	I	S	P	F	A	H	Y	N	E	A	G	D	T	N	P	T	A	L	G	L	Y	M	V	E	S	L	N	K	Y
Template Known Secondary structure		T	T	S								T	T	T					S	T	T	S	S	S																					G	G	.	G							T	T			T	T	T				S														G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	R	V	V	K	Y	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																			.
Template Conservation																				.	.	.	.	.	.	.																			.
Template Sequence		D	L	A	Y	C	H	V	V	E	P	R	M	K	T	C	T	E	S	.	.	.	.	.	.	.	L	V	P	M	R	K	A	Y	K	G	T	F	I	V	A	G	G	Y	.	D	R	E	D	G	N	R	A	L	I	E	D	R	A	D	L	V	A	Y	G	R	L	F	I	S	N	P	D	L	P	K	R	F	E	L	N
Template Known Secondary structure				S								S								.	.	.	.	.	.	.	S									S						S	S		.											T	T	S		S					S							T	T								T
Template Predicted Secondary structure																				.	.	.	.	.	.	.																			.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		241	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	R	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	L	N	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions