Job Description P33371 Confidence 96.57% Date Thu Jan 5 11:52:10 GMT 2012 Rank 373 Aligned Residues 145 % Identity 13% Template d1geha1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																							.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		K	D	R	P	I	Y	G	V	V	P	K	P	K	V	G	Y	S	P	E	E	F	E	K	L	A	Y	D	L	L	S	N	G	A	D	Y	M	.	.	.	.	.	.	K	D	D	E	N	L	T	S	P	W	Y	N	R	F	E	E	R	A	E	I	M	A	K	I	I	D	K	V	E	N	E	T	G	E	K	K	T	W
Template Known Secondary structure			S	S								S	S		S	S																T	T					.	.	.	.	.	.				T	T					T	T	S																				T		S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.													200	.
Predicted Secondary structure																																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	.	.	.	R	L	N	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	N	G
Query Conservation																																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																								.	.	.	.	.	.	.	.	.																.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		F	A	N	I	T	.	.	.	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	.	.	.	.	.	.	.	.	.	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H
Template Known Secondary structure				B			.	.	.	S	S															T							.	.	.	.	.	.	.	.	.																				T	T								T	T	G	G	G	T	S	S		T	T	S
Template Predicted Secondary structure							.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		G	I	.	S	M	F	V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G
Template Known Secondary structure		S		.													T		S
Template Predicted Secondary structure				.
Template SS confidence
		295	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions