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Job DescriptionP33371
Confidence99.62%DateThu Jan 5 11:52:10 GMT 2012
Rank56Aligned Residues106
% Identity19%Templatec3tdmD_
PDB info PDB header:de novo proteinChain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140........ .150.........160.........170.........180.........190.........200.........210.
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Query Sequence  HLPVSVKVRLGWDSGE. KKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQ
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Template Sequence  DGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY. . DTEMIRFVRPLTTLPIIASGGAGKMEHFLE
Template Known Secondary structure  TTTT
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   14.....20.........30.........40.........50.........60. ........70.........80.........90.
 
   212.......220.........230.........240.
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Query Sequence  CMAISGCDAVMIGRGALNIPNLSRVVKYNE
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Template Sequence  AFL. RGADKVSINTAAVENPSLITQIAQTF
Template Known Secondary structure  .TT
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   92.. .....100.........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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