Job Description P33371 Confidence 99.93% Date Thu Jan 5 11:52:10 GMT 2012 Rank 26 Aligned Residues 229 % Identity 17% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	V	L	L	A	P	M	E	G	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		N	C	L	M	N	A	A	G	V	Y	C	M	T	R	E	E	L	A	A	I	D	H	S	E	.	A	G	S	F	V	T	T	G	T	L	E	E	R	A	G	N	P	Q	P	R	Y	A	D	T	K	L	G	S	I	N	S	M	G	L	P	N	L	G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S
Template Known Secondary structure			S					T	T	S	S		S	S									T	S	S	.		S	B		B			B		S	S		B			S		S							S	S										B	S															S	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	R	V	Q	L	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.																							.	.
Template Conservation																																										.	.	.	.	.	.																							.	.
Template Sequence		K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	.	.	.	.	.	.	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	.	.	T	K	P	L	G	I	K	L	P	P
Template Known Secondary structure											S	S										T	T	T	S	S			S							S				S		.	.	.	.	.	.				G	G	G													T	T	T		.	.		S
Template Predicted Secondary structure																																										.	.	.	.	.	.																							.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	.	.	I	P	V	I	A	N	G
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence					.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation					.	.
Template Sequence		Y	F	D	.	.	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T	G
Template Known Secondary structure					.	.																S																T	T						G	G	G							G	G	G													T	T	S		T	T	S						S
Template Predicted Secondary structure					.	.
Template SS confidence
		169	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	.	P	N	L	S	R	V	V	K	Y	N	E	P
Query Conservation																															.
Alig confidence				.											.																.
Template Conservation				.											.
Template Sequence		G	V	.	T	G	R	D	A	F	E	H	I	L	.	C	G	A	S	M	V	Q	I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K	E	L	A
Template Known Secondary structure				.											.		T		S					S								T
Template Predicted Secondary structure				.											.
Template SS confidence
		249	250		.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions