Job Description P33371 Confidence 97.30% Date Thu Jan 5 11:52:10 GMT 2012 Rank 330 Aligned Residues 144 % Identity 16% Template c3nwrA_ PDB info PDB header:lyase Chain: A: PDB Molecule:a rubisco-like protein; PDBTitle: crystal structure of a rubisco-like protein from burkholderia fungorum Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		K	D	R	P	M	I	G	T	I	I	K	P	N	V	G	L	S	A	A	E	T	A	A	L	V	R	E	L	C	E	A	G	V	D	F	I	D	D	E	V	C	A	N	P	A	H	.	.	.	.	.	.	.	A	P	L	A	E	R	V	R	A	V	M	S	E	V	R	R	Y	R	E	R	S	G	R	P	V	M	V
Template Known Secondary structure			S	S								S	S	S	S																		T		S	B				T	T		S	S		T	T	.	.	.	.	.	.	.	S																					S				B
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.													200	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	I	W
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																								.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation							.	.	.																								.	.	.	.	.	.	.	.	.																																								.
Template Sequence		A	F	N	I	T	.	.	.	D	D	L	D	A	M	R	R	H	A	E	L	V	E	R	E	G	G	S	C	V	M	A	.	.	.	.	.	.	.	.	.	S	I	N	W	C	G	F	S	A	I	Q	S	L	R	R	T	T	P	L	V	L	H	A	H	R	N	G	Y	G	M	M	S	R	D	P	A	L	G	M	.
Template Known Secondary structure							.	.	.	S															T	T							.	.	.	.	.	.	.	.	.																			S							T	T	T	T	T	T	T	S	S	T	T				.
Template Predicted Secondary structure							.	.	.																								.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		233	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	Q	A	Y	Q	T	L	W	R	L	S	G	V	D	H	M	H	V	H
Template Known Secondary structure												T	B	T		S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions