Job Description P33371 Confidence 90.25% Date Thu Jan 5 11:52:10 GMT 2012 Rank 495 Aligned Residues 125 % Identity 18% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		V	P	A	H	L	P	V	S	V	K	.	.	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q
Query Conservation												.	.
Alig confidence												.	.																																				.	.	.	.	.	.	.	.																					.
Template Conservation																																																	.	.	.	.	.	.	.	.																					.
Template Sequence		I	G	G	D	A	P	I	V	V	Q	S	M	T	S	T	K	T	H	D	V	E	A	T	L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	A	V	P	H	K	E	D	.	.	.	.	.	.	.	.	V	E	A	L	E	E	I	V	K	K	S	P	M	P	V	I	A	D	I	H	.	F	A	P	S
Template Known Secondary structure			S	T	T	S										S		T	T															T	T										S				.	.	.	.	.	.	.	.												S	S								.	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.																					.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																									.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	V	K	Y	N	E	P	R	M	P	W	P	E	V	V	A	L	L	Q	K	Y	T	R	L	E	K	Q	G
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		Y	A	F	L	S	M	E	.	K	G	V	H	G	I	R	I	N	P	G	N	I	G	K	E	E	I	V	R	E	I	V	E	E	A	K	R	R	G	V	A	V	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E	K	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	R	W	S	E	K	F	E	K	W
Template Known Secondary structure									.	T	T		S										S																T									G	G	G										S	S																				T
Template Predicted Secondary structure									.
Template SS confidence
		88	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		264
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		167

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions