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Job DescriptionP33371
Confidence98.33%DateThu Jan 5 11:52:10 GMT 2012
Rank201Aligned Residues146
% Identity16%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.........140..
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Query Sequence  TLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRL
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Template Sequence  KPLIPVIVIDDLVHAIPXAKALVAGGVHLLEVTLRTE. . . . . . . . . . . . . . . . . . AGLAAISAIKKAVP. EAIVGAGTVC
Template Known Secondary structure 
S

S
GGGTT

TTST..................T
T.TS


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   12.......20.........30.........40........ .50.........60.. .......70..
 
   143......150... ......160.........170.........180..
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Query Sequence  GWDSGEKKFEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ADAVQQAGATELVVHGRTKEQGYRAEHID
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Template Sequence  TADDFQKAIDAGAQFIVSPGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVXIAAQAGITQLKCFPA. . . . . . . SAIGG
Template Known Secondary structure  ST
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S



STT

TTT.......TTTT
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   73......80.........90.........100.........110.........120.........130.........140 .....
 
   183......190.... .....200.........210.........220.........230......
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Query Sequence  WQAIGDIRQRLN. IPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRV
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Template Sequence  AKLLKAWSGPFPDIQFCPTGGI. SKDNYKEYLG. LPNVICAGGSWLTESKLLIEG
Template Known Secondary structure  TT
TT
BSS
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TTT.STTB

SGGG
T
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   146...150.........160....... ..170....... ..180.........190........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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