Job Description P33371 Confidence 98.22% Date Thu Jan 5 11:52:10 GMT 2012 Rank 217 Aligned Residues 149 % Identity 18% Template c3gndC_ PDB info PDB header:lyase Chain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																						.	.	.											.
Template Conservation																					.	.	.	.	.	.	.	.	.																						.	.	.											.
Template Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	.	.	.	.	.	.	.	.	.	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	.	.	.	G	M	P	T	M	A	V	T	G	V	.	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M
Template Known Secondary structure								T	T		S								T	T	.	.	.	.	.	.	.	.	.	S	T	T																			.	.	.	T										.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																						.	.	.											.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	.	.	.	.	.	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	R
Query Conservation																																																.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.									.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	.	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A
Template Known Secondary structure		T		S								T	.	.	.	.	.	.	.	.	.	.	.	.	T	T							T		S	S								S																	.	T	T							S					T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.													.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		236	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		V	V	K	Y	.	.	.	.	N	E	P	R	M	P	W	P	E	V	V	A	L	L	Q	K
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		M	M	K	A	V	Q	A	V	V	H	H	N	E	T	A	D	R	A	Y	E	L	Y	L	S
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions