Return to main results Retrieve Phyre Job Id

Job DescriptionP33371
Confidence95.67%DateThu Jan 5 11:52:10 GMT 2012
Rank421Aligned Residues148
% Identity18%Templatec3gk0H_
PDB info PDB header:transferaseChain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90..... ....100 ...
Predicted Secondary structure 







...................




............................
Query SS confidence 
























. . . . . . . . . . . . . . . . . . .




. . . . . . . . . . . . . . . . . . . . . . . . . . . .


Query Sequence  GQFPQWLAENAARAVELGSWGVDLN. . . . . . . . . . . . . . . . . . . CGCPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . KTV
Query Conservation 
  

    

      
 
 



................... 


 ............................   
Alig confidence 
























...................




............................


Template Conservation 
   

    
     


 












 
 

  
        


   
 


 

   

  





 
 
Template Sequence  GTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLVPEKRSE
Template Known Secondary structure 
SS
S
TT
S

TT
SSS
TTT
SS

SS

S


SGGG
Template Predicted Secondary structure 


































Template SS confidence 















































































   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  NGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDW
Query Conservation       
  
        


 

   
    






 
             
   

  
 

 

            
Alig confidence 

























...










.......




























.


Template Conservation   






       
   
  
   ...









 .......   
  
   


 





 

 
    .   
Template Sequence  LTTEGGLDVVGHFDAVRAACKQLADA. . . GVRVSLFIDPD. . . . . . . EAQIRAAHETGAPVIELHTGRYADAHDAA. EQQ
Template Known Secondary structure  B
SS
SB
TTTTT...T

S
.......

S



S.
Template Predicted Secondary structure 








...




.......









.
Template SS confidence 















































































   108.110.........120.........130... ......140.... .....150.........160.........170... ...
 
   184.....190... ......200.........210.........220.........230
Predicted Secondary structure 
......















Query SS confidence 









. . . . . .




































Query Sequence  QAIGDIRQRL. . . . . . NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNI
Query Conservation       
    ...... 



 

 
 
   
   
   
 
 




  
 
Alig confidence 









......








.


























Template Conservation   

 

  

  
  


 





.
 
 

  
  

 
 









 
Template Sequence  REFERIATGVDAGIALGLKVNAGHG. LHYTNVQAIAALPGIAELNIGHAIVAH
Template Known Secondary structure  TT

TT.

TTTSTT
Template Predicted Secondary structure 





.









Template SS confidence 




















































   177..180.........190.........200. ........210.........220........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions