Job Description P33371 Confidence 97.81% Date Thu Jan 5 11:52:10 GMT 2012 Rank 288 Aligned Residues 200 % Identity 17% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.											.	.	.																											.	.	.
Query SS confidence																													.											.	.	.																											.	.	.
Query Sequence		P	M	E	G	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	.	V	R	V	V	D	Q	L	L	P	V	.	.	.	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	.	.	.	L	G	Q	F	P	Q	W	L	A	E
Query Conservation																													.											.	.	.																											.	.	.
Alig confidence																													.											.	.	.																											.	.	.			.
Template Conservation																																																																										.
Template Sequence		V	A	P	G	V	Y	D	G	L	S	A	R	V	A	L	S	A	G	F	D	A	L	Y	M	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D	A	D	T	G	Y	G	.	G	P	I	M	V	A	R
Template Known Secondary structure								S									T	T	T		S														T	S	S		S	S	S																		S	T	T	S							T	T		S	S	.	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.																.
Query SS confidence																																																					.	.	.																.
Query Sequence		N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	.	.	.	P	A	H	L	P	V	S	V	K	V	R	L	G	W	D	.	S	G	E	K	K	F	E	I	A	D
Query Conservation																																																					.	.	.																.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																										.	.	.																.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	.	.	.	.	.	.	.	.	.	.	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R
Template Known Secondary structure									T	T								.	.	.	.	.	.	.	.	.	.		B						B																					T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.							.	.	.
Query SS confidence																																									.							.	.	.
Query Sequence		A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	.	I	P	V	I	A	N	.	.	.	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L
Query Conservation																																									.							.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.														.							.	.	.																.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		A	A	R	D	A	G	A	D	V	G	F	L	E	G	I	T	.	.	.	.	.	.	.	.	.	.	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	.	G	F	R	I	I	I	F	P	F	A	A	L
Template Known Secondary structure							T		S					T	T			.	.	.	.	.	.	.	.	.	.												T	T	T	S		B						T	T	S	S	S												.	T		S					T	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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