Job Description P33371 Confidence 96.99% Date Thu Jan 5 11:52:10 GMT 2012 Rank 347 Aligned Residues 157 % Identity 13% Template c3exsB_ PDB info PDB header:lyase Chain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A
Query Conservation
Alig confidence																														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	L	V	E	V	L	R	S	L	F	P	D	K	I	I	V	A	D	T	K	C	A	D	A	G	G	T	.	.	V	A	K	N	N	A	V	R	G	A	D	W	M	T	C	I	C	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	T	M	K	A	A	R	K	A	I	E	D	I
Template Known Secondary structure		T											S	S	S										S					.	.							T	T	T		S						T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		V	P	A	H	L	P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	.	.	N	I	P	V	I	A	N	G	E	I	W	D	W	Q
Query Conservation																																																																		.	.
Alig confidence																		.	.	.	.	.																				.	.	.	.	.	.	.	.																	.	.											.
Template Conservation																		.	.	.	.	.																				.	.	.	.	.	.	.	.																													.
Template Sequence		N	P	D	K	G	E	I	Q	V	E	L	Y	G	D	W	T	.	.	.	.	.	Y	D	Q	A	Q	Q	W	L	D	A	G	I	S	Q	A	I	Y	H	Q	.	.	.	.	.	.	.	.	S	R	T	W	G	E	K	D	L	N	K	V	K	K	L	I	E	M	G	F	R	V	S	V	T	G	G	L	.	S	V	D
Template Known Secondary structure			T	T	T									S	S			.	.	.	.	.										T	T									.	.	.	.	.	.	.	.																			T							S	S		.		T	T
Template Predicted Secondary structure																		.	.	.	.	.																				.	.	.	.	.	.	.	.																													.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	R	V	V	K	Y
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		T	L	K	L	F	E	G	.	V	D	V	F	T	F	I	A	G	R	G	I	T	E	A	K	N	P	A	G	A	A	R	A
Template Known Secondary structure		T	G	G	G	G	T	T	.	S			S										S	S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		181	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions