Job Description P33371 Confidence 92.09% Date Thu Jan 5 11:52:10 GMT 2012 Rank 472 Aligned Residues 147 % Identity 14% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	.	.	.	.	.	.	.	.	V	P	A
Query Conservation																																																																							.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.		.	.
Template Conservation																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V	.	.	.	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	.	.
Template Known Secondary structure		T	T	S									S						.	.	.							T	T		S						T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S									T	T						T	T				.	.
Template Predicted Secondary structure																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		H	L	P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	.	.	.	.	.	.	.	.	R	L	N	I	P	V	I	A	N	G	E	I	W
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence												.														.	.	.	.	.								.	.																						.	.	.	.	.	.	.	.													.
Template Conservation												.														.	.	.	.	.								.	.																																										.
Template Sequence		P	V	L	I	G	A	C	L	C	P	.	E	T	P	I	S	E	L	E	P	Y	L	D	Q	.	.	.	.	.	I	D	V	I	Q	L	L	.	.	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	.
Template Known Secondary structure											T	.	T	S		G	G	G	G	T	T	T	T	T	T	.	.	.	.	.		S						.	.	S			T	T	T	T																				G	G	G	G	G	G							S	S		.
Template Predicted Secondary structure												.														.	.	.	.	.								.	.																																										.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		D	W	Q	S	A	Q	Q	C	M	A	I	S	.	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S	R	V	V	K	Y
Query Conservation														.
Alig confidence														.															.
Template Conservation																													.
Template Sequence		T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G	.	E	L	K	T	N	L	K	V
Template Known Secondary structure												S	S	S									G	G	G	G	S	S	.
Template Predicted Secondary structure																													.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions