Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 20 Aligned Residues 237 % Identity 21% Template c3atyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.										.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																		.	.	.	.	.												.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																																		.	.	.	.	.												.	.
Query Sequence		R	V	L	L	A	P	M	E	G	V	L	.	.	.	.	.	.	.	.	.	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	.	.	.	.	.	F	H	R	I	C	P	E	L	Q	N	A	.	.	S	R	T	P	S	G	T	L	V
Query Conservation													.	.	.	.	.	.	.	.	.																																		.	.	.	.	.												.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																		.	.	.	.	.												.	.
Template Conservation
Template Sequence		R	I	I	M	A	P	L	T	R	C	Q	A	T	E	D	D	H	V	P	R	T	E	S	M	L	K	Y	Y	E	D	R	A	S	A	G	L	I	I	A	E	A	T	M	V	Q	P	N	Y	T	G	F	L	T	E	P	G	I	Y	S	D	A	Q	I	E	E	W	R	K	I	V	D	A	V	H	K	K	G	G	L	I
Template Known Secondary structure		S											B		T	T	T			B											T	T	T	T	S	S									S	S	T	T			S	S	S	S			B	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		66	.	.	.	70	.	.																																																																	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	Q	L	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	W	L	A	E	N	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	Q	L	I	H	A	G	R	A	G	I	P	E	K	I	L	Q	Q	S	K	S	D	Q	D	P	L	A	G	R	L	L	A	A	S	A	I	P	I	K	D	H	R	I	P	A	Y	F	A	A	S	G	E	K	E	T	Y	G	V	P	E	E	L	T	D	D	E	V	R	D	G	I	I	P	L	F	V	E	G	A
Template Known Secondary structure									G	G	G	S						T	T	S				S	S	S	T	T	T	T					S	S	S					S			B		T	T	T	S	T	T	S	S		B																T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		82	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.
Predicted Secondary structure						.														.	.	.	.	.	.	.	.	.										.	.																																		.	.	.	.	.	.	.	.
Query SS confidence						.														.	.	.	.	.	.	.	.	.										.	.																																		.	.	.	.	.	.	.	.
Query Sequence		A	R	A	V	.	E	L	G	S	W	G	V	D	L	N	C	G	C	.	.	.	.	.	.	.	.	.	P	S	K	T	V	N	G	S	G	.	.	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	.	.	.	.	.	.	.	.	R
Query Conservation						.														.	.	.	.	.	.	.	.	.										.	.																																		.	.	.	.	.	.	.	.
Alig confidence						.														.	.	.	.	.	.	.	.	.										.	.																												.						.	.	.	.	.	.	.	.
Template Conservation																																																																			.
Template Sequence		K	N	A	I	F	K	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	L	D	A	F	F	R	E	S	S	N	K	R	Q	S	G	P	Y	A	G	T	T	I	D	T	R	C	Q	L	I	Y	D	V	T	K	S	V	C	D	A	V	G	S	D	R	.	V	G	L	R	I	S	P	L	N	G	V	H	G	M
Template Known Secondary structure							T	S			S								T	T	S							S	T	T	T					S	S	T	T		T	T	S																					G	G	G	.							T	T			G	G	G
Template Predicted Secondary structure																																																																			.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V
Query Conservation
Alig confidence																																		.	.	.	.	.																								.
Template Conservation																																		.	.	.	.	.																								.
Template Sequence		I	D	S	N	P	E	A	L	T	K	H	L	C	K	K	I	E	P	L	S	L	A	Y	L	H	Y	L	R	G	D	M	V	.	.	.	.	.	N	Q	Q	I	G	D	V	V	A	W	V	R	G	S	Y	S	G	V	K	I	S	N	L	.	R	Y	D	F	E	E	A	D	Q	Q	I	R	E	G	K	V	D	A	V
Template Known Secondary structure				S														G	G	G			S							S		T	T	.	.	.	.	.	S												T	T			S						S	.	S												T	T	S		S
Template Predicted Secondary structure																																		.	.	.	.	.																								.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	G	R	G	A	L	N	I	P	N	L	S	R	V	V	K	Y	N	E	P	R	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	G	A	K	F	I	A	N	P	D	L	V	E	R	A	Q	Q	N	W	P	L	N	E
Template Known Secondary structure				S							T	T								T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions