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Job DescriptionP33371
Confidence98.07%DateThu Jan 5 11:52:10 GMT 2012
Rank244Aligned Residues147
% Identity29%Templatec2yzrB_
PDB info PDB header:lyaseChain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from2 methanocaldococcus jannaschii
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  AENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAV
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Template Sequence  VEQAQIAEEAGAVAVMALERVPADIRAAG. . GVARMSDPALIEEIMDAV. . . . . . SIPVMAKCRIGH. . . . . . TTEALVL
Template Known Secondary structure  T
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   27..30.........40.........50..... ....60.........70... ......80..... ....90..
 
   158.160......... 170.........180..
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Query Sequence  QQAGATELVVHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTKEQGYRAEHID. . . . . . . . . . . . . .
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Template Sequence  EAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQ
Template Known Secondary structure  TT
STTS

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GGG
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T
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   183......190........ .200....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WQAIGDIRQRLNIPVI. . ANGEIW
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Template Sequence  LQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVA
Template Known Secondary structure  TTS
GGGGTTS
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TTSTTTS
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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   205....210.........220.........230.........
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Query Sequence  DWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY
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Template Sequence  TPADAALMMQL. GSDGVFVGSGIFKSENPLERARA
Template Known Secondary structure  ST.T
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   253......260... ......270.........280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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