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Job DescriptionP33371
Confidence98.96%DateThu Jan 5 11:52:10 GMT 2012
Rank103Aligned Residues151
% Identity20%Templatec2v82A_
PDB info PDB header:lyaseChain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKV
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Template Sequence  TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWE. . . . . . . . . . . . . . . . . . QSIPAIVDAYGDKALIGAGT
Template Known Secondary structure  SSS

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   5....10.........20.........30.........40...... ...50.........60......
 
   141........150... ......160.........170.........180......
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Query Sequence  RLGWDSGEKKFEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ADAVQQAGATELVVHGRTKEQGYRAEHIDWQAI
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Template Sequence  VLKPEQVDALARXGCQLIVTPNIHSEVIRRAVGYGXTVCPGCATATEAFTALEAGAQALKI. . . . . . . . FPSSAFGPQYI
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   67..70.........80.........90.........100.........110.........120....... ..130........
 
   187..190... ......200.........210.........220.........230.........
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Query Sequence  GDIRQRL. . NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY
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Template Sequence  KALKAVLPSDIAVFAVGGV. TPENLAQWID. AGCAGAGLGSDLYRAGQSVERTAQ
Template Known Secondary structure  TTS
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   139140.........150....... ..160....... ..170.........180.........190.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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