Job Description P33371 Confidence 96.52% Date Thu Jan 5 11:52:10 GMT 2012 Rank 379 Aligned Residues 144 % Identity 17% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure												.	.	.	.																							.	.
Query SS confidence												.	.	.	.																							.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	.	.	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L
Query Conservation												.	.	.	.																							.	.
Alig confidence												.	.	.	.																							.	.											.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		F	D	R	P	I	F	F	G	V	I	K	P	N	I	G	L	P	P	Q	P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	D	W	C	.	.	.	.	.	.	.	.	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K
Template Known Secondary structure			S	S								S	S		T	T			S														T		S						T	T			S		T	T	S	.	.	.	.	.	.	.	.																					S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																									.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	A	N	I	.	.	.	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A	L	L	I	.	.	.	.	.	.	.	.	.	N	A	M	P	V	G	L	S	A	V	R	M	L	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G
Template Known Secondary structure								.	.	.				T	T												T	T							.	.	.	.	.	.	.	.	.															T	T			S							T	T						S		T	T	S
Template Predicted Secondary structure								.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
			205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P
Template Known Secondary structure															T		S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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