|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | G | V | L | D | S | L | V | R | E | L | L | T | E | V | N | D | Y | D | L | C | I | T | E | . |
. |
. |
F | V | R | V | V | D | Q | L | L | P | V | K | V | F | H | R | I | C | P | E | L | Q | N | A | S | R | T | P | S | G | T | L | V | R | V | Q | L | L | G | Q | F | P | Q | W | L | A | E | N | A | A | R | A |
Query Conservation |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|
| . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |
|
|
|
|   |   |   |
|
| . |
|   |
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | P | T | V | W | D | T | W | S | A | G | L | V | E | E | A | G | . |
F | S | G | L | T | I | G | S | H | P | V | A | D | A | T | G | S | S | D | G | E | N | X | N | F | A | D | Y | X | A | V | V | K | K | I | T | S | A | V | S | I | P | V | S | V | D | V | E | S | G | Y | G | L | S | P | A | D | L | I | A | Q | I |
Template Known Secondary structure |   |
|
|  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | . |
| S |
|  |  |  |
|  |  |  |  |  |  |  | T | T |
|
| T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |
| T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | L | G | S | W | G | V | D | L | N | C | G | C | P | S | K | T | V | N | G | S | G | G | G | A | T | L | L | K | D | P | E | L | I | Y | Q | G | A | K | A | M | R | E | A | V | . |
. |
. |
P | A | H | L | P | V | S | V | K | V | R | L | . |
. |
. |
. |
. |
. |
. |
G | W | D | S | G | E | K | K | F | E | I | A |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |
| . | . | . |   |   |   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
Template Sequence |   |
L | E | A | G | A | V | G | I | N | V | E | D | . |
. |
. |
. |
. |
. |
. |
. |
V | V | H | S | E | G | K | R | V | R | E | A | Q | E | H | A | D | Y | I | A | A | A | R | Q | A | A | D | V | A | G | V | D | V | V | I | N | G | R | T | D | A | V | K | L | G | A | D | V | F | E | D | P | X | V | E | A | I | K | R | I |
Template Known Secondary structure |   |
 |  | T | T |
|
|  |  |  |  |
| S | . | . | . | . | . | . | . | . |  |  | G | G | G | T | T |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
| T | T | T | S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | V | Q | Q | A | G | A | T | E | L | V | V | H | G | R | T | K | E | Q | G | Y | R | A | E | H | I | D | W | Q | A | I | G | D | I | R | Q | R | L | N | I | P | V | I | A | N | . |
. |
. |
G | E | I | W | D | W | Q | S | A | Q | Q | C | M | A | I | S | G | C | D | A | V | M | I | G | R | G | A | L |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
| . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |
|   |   |   |
|
|   |
|   |   |   |   |
Template Sequence |   |
K | L | X | E | Q | A | G | A | R | S | V | Y | P | V | G | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | E | Q | V | E | R | L | V | D | A | V | S | V | P | V | N | I | T | A | H | P | V | D | G | H | G | A | G | D | L | A | T | L | A | G | L | . |
G | V | R | R | V | T | F | G | P | L | W | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  | T | T |
| S | S |
| B |  |  |  |
| B | T | T | T | B | B | T | T | B |
|  |  |  |  |  |  | T | . | T |
|
|  |  |  |
| T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . |
  |