Job Description P33371 Confidence 98.81% Date Thu Jan 5 11:52:10 GMT 2012 Rank 123 Aligned Residues 143 % Identity 12% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	.	.	.	.	.	.	.	.	.	.	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	V	T	D	L	D	G	V	K	R	T	A	E	E	A	R	E	R	Q	F	R	A	I	K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L	E	A	L	R	D	G	A	G	P	D	V	E	I	L	L
Template Known Secondary structure		S				S														T	T												S	S	S	S					B	G	G	G	T	B	S			T	T																								S	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C
Query Conservation
Alig confidence								.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	N	F	N	A	.	K	P	E	G	Y	L	K	I	L	R	E	L	A	D	F	D	L	F	W	V	E	.	.	.	.	.	.	.	.	.	.	.	I	D	S	Y	S	P	Q	G	L	A	Y	V	R	N	H	S	P	H	P	I	S	S	C	E	T	L	F	G	I	R	E	F	K	P	F	F	D	A	N	A	V
Template Known Secondary structure				T	T		S	.												T	T	T	S			S				.	.	.	.	.	.	.	.	.	.	.				S											T		S	S						T	T													T	T
Template Predicted Secondary structure								.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		219	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	M	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	I	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions