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Job DescriptionP33371
Confidence98.23%DateThu Jan 5 11:52:10 GMT 2012
Rank215Aligned Residues147
% Identity32%Templatec2nv2U_
PDB info PDB header:lyase/transferaseChain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  AENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAV
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Template Sequence  AEQAKIAEEAGAVAVMALERVPADIRAAG. . GVARMADPTIVEEVMNAV. . . . . . SIPVMAKARIGH. . . . . . IVEARVL
Template Known Secondary structure  TT
S
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   28.30.........40.........50...... ...60.........70.... .....80...... ...90...
 
   158.160......... 170........
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Query Sequence  QQAGATELVVHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTKEQGYRA. . . . . . . . . . . . . . . . . .
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Template Sequence  EAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRK
Template Known Secondary structure  TT
STTS

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GGG
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   179180.........190....... ..200.........210.........220.........230.........
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Query Sequence  . . . . . . . . . . . . . . . EHIDWQAIGDIRQRLNIPV. . IANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY
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Template Sequence  VVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQL. GADGVFVGSGIFKSDNPAKFAKA
Template Known Secondary structure  S
GGGT

TS
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   174.....180.........190.........200.........210.........220....... ..230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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