Job Description P33371 Confidence 100.00% Date Thu Jan 5 11:52:10 GMT 2012 Rank 14 Aligned Residues 238 % Identity 17% Template c2gq8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, fmn-binding; PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone Resolution 1.70 Å

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		2	.	.	.	.	.	.	.									10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		R	V	L	L	A	P	M	E	.	.	.	.	.	.	.	.	G	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	.	.	.	.	.	.	.	.	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V
Query Conservation										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.														.
Template Conservation																																																																								.
Template Sequence		R	I	V	M	P	P	M	T	R	S	R	A	S	Q	P	G	D	V	A	N	H	M	M	A	I	Y	Y	A	Q	R	A	S	A	G	L	I	V	S	E	G	T	Q	I	S	P	T	A	K	G	Y	A	W	T	P	G	I	Y	T	P	E	Q	I	A	G	W	R	I	V	T	E	.	A	V	H	A	K	G	C	A	I
Template Known Secondary structure		S												B	T	T	T	T	B												T	T	T	S	S									S	S	G	G	G			S	T	T			B	S	S	S													.					T	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.																																																							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	Q	L	L	G	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Q	L	W	H	V	G	R	V	T	H	P	D	N	I	D	G	Q	Q	P	I	S	S	S	T	L	K	A	E	N	V	K	V	F	V	D	N	G	S	D	E	P	G	F	V	D	V	A	V	P	R	A	M	T	K	A	D	I	A	Q	V	I	A	D	Y	R	Q	A	A	L	N	A	M	E	A	G	F	D	G
Template Known Secondary structure									T	T	S	S		G	G	G	T	T	T						S	S	S				T	T								S	S	S	S																																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		92	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		V	D	L	N	C	G	.	.	.	.	.	.	.	.	.	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	.	.	.	.	.	.	.	.	R	L	G	W	D	S	G	E	K	K	F	E	I	A
Query Conservation								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																						.						.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		I	E	L	H	A	A	N	G	Y	L	I	N	Q	F	I	D	S	E	A	N	N	R	S	D	E	Y	G	G	S	L	E	N	R	L	R	F	L	D	E	V	V	A	A	L	V	D	A	I	G	A	E	R	.	V	G	V	R	L	A	P	L	T	T	L	N	G	T	V	D	A	D	P	I	L	T	Y	T	A	A	A
Template Known Secondary structure								T	T	S							S	G	G	G					S	T	T	S	S	S					T																G	G	G	.							S	S			T	T	S				S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N	I	P	N	L	S
Query Conservation
Alig confidence																									.	.	.																								.
Template Conservation																									.	.	.																								.
Template Sequence		A	L	L	N	K	H	R	I	V	Y	L	H	I	A	E	V	D	W	D	D	A	P	D	.	.	.	T	P	V	S	F	K	R	A	L	R	E	A	Y	Q	G	V	L	I	Y	A	G	R	Y	.	N	A	E	K	A	E	Q	A	I	N	D	G	L	A	D	M	I	G	F	G	R	P	F	I	A	N	P	D	L	P
Template Known Secondary structure								T		S								B	T	T	B				.	.	.															S						S	S		.											T	T	S		S												T	T
Template Predicted Secondary structure																									.	.	.																								.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		235	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	K	Y	N	E	P	R	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	R	H	G	Y	P	L	A	E
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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