Job Description P33371 Confidence 99.51% Date Thu Jan 5 11:52:10 GMT 2012 Rank 64 Aligned Residues 201 % Identity 19% Template c2e77B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																																										.
Query SS confidence														.	.	.	.	.	.																																																										.
Query Sequence		M	R	V	L	L	A	P	M	E	G	V	L	.	.	.	.	.	.	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	.	L	G	Q	F
Query Conservation														.	.	.	.	.	.																																																										.
Alig confidence														.	.	.	.	.	.													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	F	I	M	A	P	I	A	A	H	G	L	A	H	T	T	K	E	A	G	T	A	R	A	V	S	E	F	G	.	T	I	M	S	I	S	A	Y	S	G	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	I	S	E	G	L	N	G	G	P	R	W	F	Q	I	Y	M	A	K	D
Template Known Secondary structure		S	S							S		G	G	G	T		T	T													T	.	S						T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T											S	S
Template Predicted Secondary structure																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.		.	.	.	1120	.	.	.	.	.	.	.	.																.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																												.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	L	I	Y	Q	G	A	K	A	M
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	Q	N	R	D	I	L	D	E	A	K	S	D	G	A	T	A	I	I	L	T	A	D	S	T	V	S	G	N	R	D	R	D	V	K	N	K	F	V	Y	P	F	G	M	P	I	V	Q	R	Y	L	R	G	T	A	E	G	M	S	L	N	N	I	Y	G	A	S	K	Q	K	I	S	P	R	D	I	E	E	I
Template Known Secondary structure																T		S							S		S	S										T	T				S	S			T	T	T	G	G	G	T	T	S		G	G	G										S		S
Template Predicted Secondary structure
Template SS confidence
		1151	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		R	E	A	V	P	A	H	L	P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	.	.	N	I	P	V	I	A	N	G	E	I	W
Query Conservation																																																																					.	.
Alig confidence						.	.								.	.	.									.	.	.	.																										.														.	.
Template Conservation						.	.								.	.	.									.	.	.	.																										.
Template Sequence		A	G	H	S	.	.	G	L	P	V	F	V	K	.	.	.	G	I	Q	H	P	E	D	A	.	.	.	.	D	M	A	I	K	R	G	A	S	G	I	W	V	S	N	H	G	A	R	Q	L	Y	E	A	P	.	G	S	F	D	T	L	P	A	I	A	E	R	V	N	K	R	V	P	I	V	F	D	S	G	V	R
Template Known Secondary structure						.	.		S						.	.	.				S					.	.	.	.						T	T		S							G	G	G	T	S	S	S	S			.														T	T	S	S						S	S
Template Predicted Secondary structure						.	.								.	.	.									.	.	.	.																										.
Template SS confidence
		1231	.	.	.			.	.	.	.	.	1240	.				.	.	.	.	.	.	.	.					1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.		.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		R	G	E	H	V	A	K	A	L	A	S	.	G	A	D	V	V	A	L	G	R	P	V	L
Template Known Secondary structure		S										T	.	T		S
Template Predicted Secondary structure													.
Template SS confidence
		1301	.	.	.	.	.	.	.	.	1310	.		.	.	.	.	.	.	.	.	1320	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions