Job Description P33371 Confidence 90.09% Date Thu Jan 5 11:52:10 GMT 2012 Rank 498 Aligned Residues 133 % Identity 13% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																		.	.	.	.	.	.	.								.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.								.	.	.	.
Query Sequence		F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	.	.	.	.	.	.	.	S	W	G	V	D	L	N	.	.	.	.	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V	S	V	K	V	R
Query Conservation																		.	.	.	.	.	.	.								.	.	.	.
Alig confidence																		.	.	.	.	.	.	.								.	.	.	.									.	.	.	.	.																	.	.	.	.	.	.	.										.
Template Conservation																																												.	.	.	.	.																	.	.	.	.	.	.	.										.
Template Sequence		N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	.	.	.	.	.	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	.	.	.	.	.	.	.	F	G	K	P	I	I	L	S	T	.
Template Known Secondary structure																T	T									S											T		S					.	.	.	.	.		G	G	G	T	T										T	.	.	.	.	.	.	.	T		S							.
Template Predicted Secondary structure																																												.	.	.	.	.																	.	.	.	.	.	.	.										.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	.	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A
Query Conservation																																																						.
Alig confidence		.																																						.														.																							.
Template Conservation		.																																						.																																					.
Template Sequence		.	G	M	N	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	.	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	A	V	A	L	.	G	G	S	I
Template Known Secondary structure		.	T	T																	T												S	S						.			T	T										T	T	S								S	S	S	S										.	T
Template Predicted Secondary structure		.																																						.																																					.
Template SS confidence
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.
		221
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		233

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions