Job Description P33371 Confidence 96.06% Date Thu Jan 5 11:52:10 GMT 2012 Rank 399 Aligned Residues 144 % Identity 16% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

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		61	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure												.	.	.	.																							.	.
Query SS confidence												.	.	.	.																							.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	L	.	.	.	.	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	.	.	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L
Query Conservation												.	.	.	.																							.	.
Alig confidence												.	.	.	.																							.	.											.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		H	G	R	P	I	F	F	G	V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	.	.	.	.	.	.	.	.	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K
Template Known Secondary structure			S	S								S	S		T	T																	T		S						T	T		S	S	B	T	T	B	.	.	.	.	.	.	.	.																					S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		1162	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.									1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	L	N	I	P	V	I	A	N	G	E	I	W	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																									.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	A	N	I	.	.	.	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	.	.	.	.	.	.	.	.	.	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G
Template Known Secondary structure								.	.	.				G	G	G												T							.	.	.	.	.	.	.	.	.															T	T		S	S							T	T	T						S	T	T	S
Template Predicted Secondary structure								.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1234	.	.	.	.	.				1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.										.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
			205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P
Template Known Secondary structure															T		S
Template Predicted Secondary structure
Template SS confidence
		1302	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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