Job Description P33371 Confidence 95.92% Date Thu Jan 5 11:52:10 GMT 2012 Rank 409 Aligned Residues 146 % Identity 13% Template c1rldB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:ribulose 1,5 bisphosphate carboxylase/oxygenase (large PDBTitle: solid-state phase transition in the crystal structure of ribulose 1,5-2 biphosphate carboxylase(slash)oxygenase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		S	G	T	L	V	R	V	Q	L	.	.	.	.	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L	P	V
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																								.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	.	.	.	.	.	.	K	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	E	A	E	T	G	E	I	K	G	H
Template Known Secondary structure			S	S								S	S	S	S	S	S															T	T		S			.	.	.	.	.	.				T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.													200	.
Predicted Secondary structure																																																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	.	.	.	Q	R	L	N	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	N	G
Query Conservation																																																								.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																							.	.	.	.	.	.	.	.	.															.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	N	A	T	A	G	.	.	T	C	E	E	M	I	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	.	.	.	.	.	.	.	.	.	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H
Template Known Secondary structure								S	.	.	S															T		S					.	.	.	.	.	.	.	.	.		T	T	T	S																T								T	T						S		S	S	S
Template Predicted Secondary structure									.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		G	I	H	F	R	V	.	L	A	K	A	L	R	M	S	G	G	D	H	I	H	S	G
Template Known Secondary structure								.											S
Template Predicted Secondary structure								.
Template SS confidence
		308	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions