Return to main results Retrieve Phyre Job Id

Job DescriptionP33371
Confidence97.61%DateThu Jan 5 11:52:10 GMT 2012
Rank312Aligned Residues107
% Identity21%Templatec1lm1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin-dependent glutamate synthase; PDBTitle: structural studies on the synchronization of catalytic centers in2 glutamate synthase: native enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170..... ....180.......
Predicted Secondary structure 






















........






Query SS confidence 



























































. . . . . . . .











Query Sequence  PELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQG. . . . . . . . YRAEHIDWQAIG
Query Conservation       


 

   
    






 
             
   

  
 

 

    ........            
Alig confidence 















.












....

























........











Template Conservation 







  

  
 . 
 
 



   
....




 




 

 
 


 







  


  


 
 

 
Template Sequence  IEDLAQLIYDLHQINP. EAQVSVKLVAEIG. . . . IGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTE
Template Known Secondary structure 
T.TS

TT....TT
S
TT


SSB


Template Predicted Secondary structure 


.





....

















Template SS confidence 















































































   1012.......1020....... ..1030.........1040 .........1050.........1060.........1070.........1080......
 
   188.190.... .....200.........210.........220........
Predicted Secondary structure 

......












Query SS confidence 






. . . . . .

































Query Sequence  DIRQRLN. . . . . . IPVIANGEIWDWQSAQQCMAISGCDAVMIGRGAL
Query Conservation   
     ......



 

 
 
   
   
   
 
 




  
Alig confidence 






......




















.











Template Conservation      
   


 

 
 




 
  

  
  
.


    

  
Template Sequence  VHRVLMENQLRDRVLLRADGGLKTGWDVVMAALM. GAEEYGFGSIAM
Template Known Secondary structure  TT
GGG
SS

S.T
S
S
Template Predicted Secondary structure 











.


Template SS confidence 














































   1087..1090.........1100.........1110.........1120 .........1130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions