Job Description P33371 Confidence 99.43% Date Thu Jan 5 11:52:10 GMT 2012 Rank 73 Aligned Residues 207 % Identity 14% Template c1kbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10							.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																																												.
Query SS confidence												.	.	.	.	.	.																																																												.
Query Sequence		M	R	V	L	L	A	P	M	E	G	.	.	.	.	.	.	V	L	D	S	L	V	R	E	L	L	T	E	V	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	V	R	V	Q	L	.	L	G	Q	F
Query Conservation												.	.	.	.	.	.																																																												.
Alig confidence												.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	F	Y	V	S	A	T	A	L	C	K	L	G	N	P	L	E	G	E	K	D	V	A	R	G	C	G	Q	G	V	T	K	V	P	Q	M	I	S	T	L	A	S	C	S	P	E	E	I	I	E	.	.	.	.	.	.	.	.	.	.	.	A	A	P	S	D	K	Q	I	Q	W	Y	Q	L	Y	V	N	S	D
Template Known Secondary structure		S	S							S		G	G	G	T	S	T	T	T	T										S	S	S	S								T	T		S	S								.	.	.	.	.	.	.	.	.	.	.			S		S	S											S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240												.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	W	L	A	E	N	A	A	R	A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	P	A	H	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																																														.	.
Template Sequence		R	K	I	T	D	D	L	V	K	N	V	E	K	L	G	V	K	A	L	F	V	T	V	D	A	P	S	L	G	Q	R	E	K	D	M	K	L	K	F	S	N	T	K	T	N	V	E	E	S	Q	G	A	S	R	A	L	S	K	F	I	D	P	S	L	T	W	K	D	I	E	E	L	K	K	K	T	.	.	K	L
Template Known Secondary structure																T									S		S	S													T	T				S		S	S		S	G	G	G	G	G			S	S	S		T	T												T		.	.		S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		P	V	S	V	K	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D	A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	.	.	.	.	.	.	.	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																														.													.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																														.
Template Sequence		P	I	V	I	K	G	V	Q	R	.	.	.	.	.	.	.	T	E	D	V	I	K	A	A	E	I	G	V	S	G	V	V	L	S	N	H	G	G	R	Q	L	D	F	S	R	.	A	P	I	E	V	L	A	E	T	M	P	I	L	E	Q	R	N	L	K	D	K	L	E	V	F	V	D	G	G	V	R	R	G	T
Template Known Secondary structure										S	.	.	.	.	.	.	.										T	T		S							T	T	T	T	S	S	T	T			.															T	T	T	G	G	G	T	S						S	S			S
Template Predicted Secondary structure											.	.	.	.	.	.	.																														.
Template SS confidence
		345	.	.	.	.	350	.	.	.								.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	Q	C	M	A	I	S	G	C	D	A	V	M	I	G	R	G	A	L	N
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		D	V	L	K	A	L	C	L	.	G	A	K	G	V	G	L	G	R	P	F	L	Y
Template Known Secondary structure										.	T		S
Template Predicted Secondary structure										.
Template SS confidence
		417	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions