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Job DescriptionP33371
Confidence99.84%DateThu Jan 5 11:52:10 GMT 2012
Rank33Aligned Residues194
% Identity21%Templatec1gthD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LLPVKVFHRICPELQNASRTPSGTLVRVQLLGQ. FPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPEL
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Template Sequence  LISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG. MGERGMGLACGQDPEL
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SS.GGGGT
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Query Sequence  IYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKE. . . . . . . . . . . . . . . . . . . . . . QGY
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Template Sequence  VRNICRWVRQAV. . QIPFFAKLTPNVTD. . . IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGV
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Query Sequence  RAEHID. . . WQAIGDIRQRL. NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPN. LSRVVKYN
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Template Sequence  SGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL. HSGASVLQVCSAVQNQDFTVIQDYCTG
Template Known Secondary structure  SGGGSTT

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   766...770.........780.........790.........800...... ...810.........820.........830...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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