Job Description P33371 Confidence 95.80% Date Thu Jan 5 11:52:10 GMT 2012 Rank 413 Aligned Residues 202 % Identity 18% Template c1bwvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ribulose bisphosphate carboxylase); PDBTitle: activated ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco)2 complexed with the reaction intermediate analogue 2-carboxyarabinitol3 1,5-bisphosphate Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.																																										.
Query SS confidence																			.	.																																										.
Query Sequence		P	M	E	G	V	L	D	S	L	V	R	E	L	L	T	E	V	.	.	N	D	Y	D	L	C	I	T	E	F	V	R	V	V	D	Q	L	L	P	V	K	V	F	H	R	I	C	P	E	L	Q	N	A	S	R	T	P	S	G	T	L	.	V	R	V	Q	L	L	G	Q	F	P	Q	W	L	A	E	N	A	A	R
Query Conservation																			.	.																																										.
Alig confidence																			.	.																																										.
Template Conservation
Template Sequence		P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F
Template Known Secondary structure		S	S	S																		T		S	B				T	T		S	S	B	T	T	B																					T	S			B								S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																	.										.	.	.	.	.	.	.
Query SS confidence																																																	.										.	.	.	.	.	.	.
Query Sequence		A	V	E	L	G	S	W	G	V	D	L	N	C	G	C	P	S	K	T	V	N	G	S	G	G	G	A	T	L	L	K	D	P	E	L	I	Y	Q	G	A	K	A	M	R	E	A	V	.	P	A	H	L	P	V	S	V	K	.	.	.	.	.	.	.	V	R	L	G	W	D	S	G	E	K	K	F	E	I	A	D
Query Conservation																																																	.										.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.										.	.	.	.	.	.	.										.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Sequence		A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	.	F	R	V	I	C	K
Template Known Secondary structure					T	T		S						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T								T	T	T					S		T	T	S				.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	Q	Q	A	G	A	T	E	L	V	V	H	G	R	T	K	E	Q	G	Y	R	A	E	H	I	D	W	Q	A	I	G	D	I	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	I	P	V	I	A	N	G	E	I	W	D	W	Q	S	A	Q	Q	C	M	A	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation										.	.																																																											.
Template Sequence		W	M	R	M	A	G	V	D	.	.	H	I	H	A	G	T	V	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	.	H	A	G	Q	M	H	Q	L	I	H	Y
Template Known Secondary structure							T		S	.	.							S	S	S	S	S																	S					B	T	T	T	T	B		S					T	T										S	S		.		T	T	S
Template Predicted Secondary structure										.	.																																																											.
Template SS confidence
		317	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.
		216	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		S	G	C	D	.	A	V	M	I	G	R	G	A	L	N	I	P	N
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	G	E	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	D
Template Known Secondary structure				S	S						S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions