 |
Job Description | P0ACP1 | Confidence | 89.73% | Date | Thu Jan 5 11:18:38 GMT 2012 |
Rank | 373 | Aligned Residues | 36 |
% Identity | 22% | Template | d1vz0a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| KorB DNA-binding domain-like
| KorB DNA-binding domain-like
|
Resolution | 2.3 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | L | D | E | I | A | R | L | A | G | V | S | R | T | T | A | S | Y | V | I | N | G | K | A | K | Q | Y | R | V | S | D | K | T | V | E | K | V | M | A |
Query Conservation |   |
|
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |
|
|   | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | T | Q | E | E | V | A | R | R | V | G | K | A | R | S | T | V | A | N | A | L | R | L | L | Q | . |
. |
. |
. |
L | P | P | E | A | L | E | A | L | E | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | G | G | G | . | . | . | . | S |
|  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|