Job Description P0ACP1 Confidence 95.00% Date Thu Jan 5 11:18:38 GMT 2012 Rank 109 Aligned Residues 224 % Identity 15% Template c3t0nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal; PDBTitle: crystal structure of twin-arginine translocation pathway signal from2 rhodopseudomonas palustris bisb5 Resolution 2.22 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																.	.	.	.	.	.	.																								.
Query SS confidence																					.	.																.	.	.	.	.	.	.																								.
Query Sequence		A	G	R	T	R	S	I	G	L	V	I	P	D	L	E	N	T	S	Y	.	.	T	R	I	A	N	Y	L	E	R	Q	A	R	Q	R	G	.	.	.	.	.	.	.	Y	Q	L	L	I	A	C	S	E	D	Q	P	D	N	E	M	R	C	I	E	H	L	L	.	Q	R	Q	V	D	A	I	I	V	S	T	S	L
Query Conservation																					.	.																.	.	.	.	.	.	.																								.
Alig confidence																					.	.																.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		A	E	D	T	F	K	V	G	L	I	V	P	X	T	G	G	Q	A	S	T	G	K	Q	I	D	N	A	I	K	L	Y	I	K	K	H	G	D	T	V	A	G	K	K	I	E	V	I	L	K	D	D	A	A	I	P	D	N	T	K	R	L	A	Q	E	L	I	V	N	D	K	V	N	V	I	A	G	F	G	I	T
Template Known Secondary structure			T	T										S	S	S	T	T																				S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		P	P	E	H	P	F	Y	Q	R	W	A	N	D	P	F	P	I	V	A	L	D	R	A	L	D	R	.	.	.	.	.	E	H	F	T	S	V	V	G	A	D	Q	D	D	A	E	M	L	A	E	E	L	R	K	F	P	A	E	T	V	L	Y	L	G	A	L	P	E	L	S	V	S	F	L	R	E	Q	G	F	R
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.																																		.	.
Template Conservation																																																																		.	.
Template Sequence		P	A	A	L	A	A	A	P	L	A	T	Q	A	K	V	P	E	I	V	X	A	A	G	T	S	I	I	T	E	R	S	P	Y	I	V	R	T	S	F	T	L	A	Q	S	S	I	I	I	G	D	W	A	A	K	N	G	I	K	K	V	A	T	L	T	.	.	S	D	Y	A	P	G	N	D	A	L	A	F	F	K
Template Known Secondary structure															T						S	S				G	G	G	G	G	G		T	T				S	S																	T	T									.	.		S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	W	K	D	D	P	R	E	V	H	F	L	Y	A	N	S	Y	E	R	E	A	A	A	Q	L	F	E	K	W	L	E	T	H	P	M	P	Q	A	L	F	T	T	S	F	A	L	L	Q	G	V	M	D	V	T	L	R	R	D	G	K	L	P	S	D	L	A	I	A	T	F	G	D	N	E	L	L	D	F	L
Query Conservation
Alig confidence																																																		.														.
Template Conservation																																																		.														.
Template Sequence		E	R	F	T	A	G	G	G	E	I	V	E	E	I	K	V	P	L	A	N	P	D	F	A	P	F	L	Q	R	X	K	D	A	K	P	D	A	X	F	V	F	V	P	A	G	Q	G	G	.	N	F	X	K	Q	F	A	E	R	G	L	D	K	.	S	G	I	K	V	I	G	P	G	D	V	X	D	D	D	L	L
Template Known Secondary structure							T	T											S	S	S													S			S								T	T				.									T	T	G	G	G	.	T	T							G	G	G	G
Template Predicted Secondary structure																																																		.														.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		283	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	X
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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