Job Description P0ACP1 Confidence 100.00% Date Thu Jan 5 11:18:38 GMT 2012 Rank 19 Aligned Residues 272 % Identity 18% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

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		60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		R	T	R	S	I	G	L	V	I	P	D	L	.	.	.	.	E	N	T	S	Y	T	R	I	A	N	Y	L	E	R	Q	A	R	Q	R	G	Y	Q	L	L	I	A	C	S	E	D	Q	P	D	N	E	M	R	C	I	E	H	L	L	Q	R	Q	V	D	A	I	I	V	S	T	S	L	P	P	E	H	P	F	Y	Q
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																										.																																	.
Template Conservation																																											.																																	.
Template Sequence		R	T	D	A	I	A	L	A	Y	P	S	R	P	R	V	L	N	N	S	T	F	L	E	X	I	S	W	I	G	I	E	L	G	K	R	G	L	D	L	L	L	.	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	T	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	.	D	F	R	L	Q
Template Known Secondary structure												S	S	S	G	G	G																		T	T	T						.					T	T												T	T			S						S			S	S	.
Template Predicted Secondary structure																																											.																																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		R	W	A	N	D	P	F	P	I	V	A	L	D	R	A	L	D	R	E	H	F	T	S	V	V	G	A	D	Q	D	D	A	E	M	L	A	E	E	L	R	K	F	P	A	E	T	V	L	Y	L	G	A	L	P	E	L	S	V	S	F	L	R	E	Q	G	F	R	T	A	W	K	D	D	.	.	P	R	E	V	H
Query Conservation																																																																											.	.
Alig confidence																																																																											.	.
Template Conservation
Template Sequence		Y	L	Q	K	Q	N	F	P	F	L	A	L	G	R	S	H	L	P	K	P	Y	A	W	F	D	F	D	N	H	A	G	A	S	L	A	V	K	R	L	L	E	L	G	H	Q	R	I	A	F	V	S	T	D	A	R	I	S	Y	V	D	Q	R	L	Q	G	Y	V	Q	T	X	S	E	A	G	L	X	P	L	A	G
Template Known Secondary structure						T	T							S					S	S																							T	T			S								S		S																	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	Y	A	N	S	Y	E	R	E	A	A	A	Q	L	F	E	K	W	L	E	T	H	P	M	P	Q	A	L	F	T	T	S	F	A	L	L	Q	G	V	M	D	V	T	L	R	R	D	G	K	L	P	S	D	L	A	I	A	T	F	G	D	N	E	L	L	D	F	L	Q	C	P	V	L	A	V	A	Q	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Q	K	A	D	P	T	R	P	G	G	Y	L	A	A	S	R	L	L	A	L	E	V	P	P	T	A	I	I	T	D	C	N	X	L	G	D	G	V	A	S	A	L	D	K	A	G	L	L	G	G	E	G	I	S	L	I	A	Y	D	G	L	P	D	D	S	L	L	D	I	A	V	T	P	I	V	Q	N	T
Template Known Secondary structure								S	S													T	S	S	S			S					S	S															T		B	S	T	T	S	B						T		S		T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		294		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		R	.	D	V	A	E	R	V	L	E	I	V	L	A	S	L	D	E	P	R	K	P	K	P	G	L	T	R	I	K	R	N	L	Y	R	R	G	V	L	S	R	S
Query Conservation			.
Alig confidence			.																	.
Template Conservation																				.
Template Sequence		R	T	S	V	G	K	Q	I	A	S	X	I	C	D	L	L	G	G	.	K	D	P	K	E	L	Q	V	L	W	Q	P	E	I	G	E	G	E	T	D	G	V	N
Template Known Secondary structure		S	S															T	T	.			G	G	G													S	S
Template Predicted Secondary structure																				.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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