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Job DescriptionP0ACP1
Confidence100.00%DateThu Jan 5 11:18:38 GMT 2012
Rank25Aligned Residues271
% Identity15%Templatec3mizB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcriptional regulator protein, laci PDBTitle: crystal structure of a putative transcriptional regulator2 protein, lacl family from rhizobium etli
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70 .........80.........90.........100.........110.........120.........130.........
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Query Sequence  TRSIGLVIPD. LENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWAN
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Template Sequence  SNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANTGGSSEREVEIWKXFQSHRIDGVLYVTXYRRIVDP. ESGDV
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   5960.........70.........80.........90.........100.........110.........120.........130.. .....
 
   140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  DPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN.
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Template Sequence  SIPTVXINCRPQTRELLPSIEPDDYQGARDLTRYLLERGHRRIGYIRLNPILLGAELRLDAFRRTTSEFGLTENDLSISL
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   219220.........230.........240.........250.........260.........270....... ..280.........290.
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Query Sequence  . . . . . . SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNE. LLDFLQCPVLAVAQ
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Template Sequence  GXDGPVGAENNYVFAAATEXLKQDDRPTAIXSGNDEXAIQIYIAAXALGLRIPQDVSIVGFDDFRTVTXALKPELTTAAL
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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   292.......300.........310.........320.........330...
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Query Sequence  RHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSR
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Template Sequence  PYYDLGREGAKWLNDLIAGEKI. YPGSRVVSCKLVERSSAAF
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   298.300.........310......... 320.........330........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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