Job Description P0ACP1 Confidence 99.97% Date Thu Jan 5 11:18:38 GMT 2012 Rank 38 Aligned Residues 258 % Identity 16% Template c3jy6B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of laci transcriptional regulator from lactobacillus2 brevis Resolution 1.97 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	G	L	V	I	P	D	L	E	N	T	S	Y	T	R	I	A	N	Y	L	E	R	Q	A	R	Q	R	G	Y	Q	L	L	I	A	C	S	E	D	Q	P	D	N	E	M	R	C	I	E	H	L	L	Q	R	Q	V	D	A	I	I	V	S	T	S	L	P	P	E	H	P	F	Y	Q	R	W	A	N	D	P
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		K	L	I	A	V	I	V	A	N	I	D	D	Y	F	S	T	E	L	F	K	G	I	S	S	I	L	E	S	R	G	Y	I	G	V	L	F	D	A	N	A	D	I	E	R	E	K	T	L	L	R	A	I	G	S	R	G	F	D	G	L	I	L	Q	S	F	S	N	.	.	P	Q	T	V	Q	E	I	L	H	Q	Q
Template Known Secondary structure									S		T	T	S															G	G	G	T									T	T															T	T		S						S	S	S		.	.									T	T	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	I	V	A	L	D	R	A	L	D	R	E	H	F	T	S	V	V	G	A	D	Q	D	D	A	E	M	L	A	E	E	L	R	K	F	P	A	E	T	V	L	Y	L	G	A	L	P	E	L	S	V	S	F	L	R	E	Q	G	F	R	T	A	W	K	D	D	P	R	E	V	H	F	L	Y	A	N	S	Y	E
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		M	P	V	V	S	V	D	R	E	M	D	A	C	P	W	P	Q	V	V	T	D	N	F	E	A	A	K	A	A	T	T	A	F	R	Q	Q	G	Y	Q	H	V	V	V	L	T	S	E	L	E	L	S	R	T	R	Q	E	R	Y	R	G	I	L	A	A	A	Q	D	V	D	V	L	E	.	V	S	E	S	S	Y	N
Template Known Secondary structure		S						S				S	S		S	S																				T	T	T											G	G	G													T	T		S							.			T	T	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	A	A	Q	L	F	E	K	W	L	E	T	H	P	M	P	Q	A	L	F	T	T	S	F	A	L	L	Q	G	V	M	D	V	T	L	R	R	D	G	K	L	P	S	D	L	A	I	A	T	F	G	D	N	E	L	L	D	F	L	Q	C	P	V	L	A	V	A	Q	R	H	R	D	V	A	E	R	V	L
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		H	S	E	V	H	Q	R	L	T	Q	L	I	T	Q	N	D	Q	K	T	V	A	F	A	L	K	E	R	W	L	L	E	F	F	P	N	L	I	I	S	G	L	I	D	N	Q	T	V	T	A	T	G	F	A	D	T	D	F	I	R	R	.	.	M	K	L	T	L	I	T	Q	N	P	F	L	M	G	A	S	S	A
Template Known Secondary structure															S	S		S							S	S															T	S			S	S	S						B				T	T	T	T	T	.	.
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	V	L	A	S	L	D	E	P	R	K	P	K	P	G	L	T	R	I	K	R	N	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		E	I	M	L	R	Q	L	A	G	E	K	V	.	A	P	E	K	M	V	I	P	A	K	L
Template Known Secondary structure									T	T				.
Template Predicted Secondary structure														.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions