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Job DescriptionP0ACP1
Confidence85.43%DateThu Jan 5 11:18:38 GMT 2012
Rank467Aligned Residues208
% Identity13%Templatec3eb2A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  EDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPA
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Template Sequence  RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGA
Template Known Secondary structure 
B
TT
S
BBTTSGGGTGGG

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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  ETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLR
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Template Sequence  DGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDASTNT. GRLLSIINR
Template Known Secondary structure  S

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   101........110.........120.........130.........140.........150.........160.........170 .........
 
   260.........270.........280.........290.........300.........310..
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Query Sequence  RDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPR
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Template Sequence  CG. . . . DALQVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVALYELCKAQR
Template Known Secondary structure  G....GGS
TTS
TT

GGGGT
TT
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   180. ........190.........200.........210.........220........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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