Job Description P0ACP1 Confidence 87.34% Date Thu Jan 5 11:18:38 GMT 2012 Rank 435 Aligned Residues 59 % Identity 27% Template c2vz4A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		K	L	D	E	I	A	R	L	A	G	V	S	R	T	T	A	S	Y	V	I	.	.	.	.	.	.	.	.	.	N	G	K	A	K	Q	Y	R	V	S	D	K	T	V	E	K	V	M	A	V	.	.	V	R	E	H	N	Y	H	P	N	A	V	A	A	G	L	R	A	G	R
Query Conservation																						.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		S	V	G	Q	V	A	G	F	A	G	V	T	V	R	T	L	H	H	Y	D	D	I	G	L	L	V	P	S	E	R	S	H	A	G	H	R	R	Y	S	D	A	D	L	D	R	L	Q	Q	I	L	F	Y	R	E	L	G	F	P	L	D	E	V	A	A	L	L	D	D	R	A
Template Known Secondary structure											T													T	S	S			S				S	S					B																	T	T											T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions