Job Description P0ACP1 Confidence 95.54% Date Thu Jan 5 11:18:38 GMT 2012 Rank 94 Aligned Residues 54 % Identity 17% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.												.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	D	E	I	A	R	L	A	G	V	S	R	T	T	A	S	Y	V	I	N	.	.	.	.	.	.	.	.	.	.	.	G	K	A	K	Q	Y	R	V	S	D	K	T	V	E	K	V	M	A	V	V	R	E	H	N	Y	H	P	N	A	V	A	A	G	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																																							.	.
Template Sequence		V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	.	.	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L
Template Known Secondary structure												T												S	G	G	G	T	T										.	.	S	S																										T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions