Return to main results Retrieve Phyre Job Id

Job DescriptionP09053
Confidence99.89%DateThu Jan 5 11:01:50 GMT 2012
Rank197Aligned Residues327
% Identity13%Templated3bc8a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases SepSecS-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  ELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNI
Query Conservation   

 


  
          
 
  
 
 
 

      
   
  
     
    
 
          
         
Alig confidence 













































...






























Template Conservation    
         
 
             
       
   
     ...   

     
 
  

    
     
   
Template Sequence  KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPK. . . AKYIIWPRIDQKSCFKSMVTAGFEPVVIENV
Template Known Secondary structure  T
TT

SS

TT...





TT


Template Predicted Secondary structure 













...







Template SS confidence 















































































   116...120.........130.........140.........150.........160. ........170.........180.........190..
 
   158.160.........170...... ...180.........190.........200.........210.........220......... 230..
Predicted Secondary structure 











....





















.

Query SS confidence 


















. . . .




















































.


Query Sequence  ELLPEGQFKYHVDFEHLHI. . . . GEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGII. FSE
Query Conservation                
    ....      
 
  
 



          
          

 
  
        .   
Alig confidence 

..














....


















...






























.


Template Conservation    ..      
   
   
          
         
  ...
 
  
            

 
 
           
Template Sequence  LE. . GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP. . . DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ
Template Known Secondary structure  ..TT


GGGSS

TTB

...

T


TTTTT
Template Predicted Secondary structure 
..




















...



















Template SS confidence 















































































   193. .....200.........210.........220.........230.. .......240.........250.........260.......
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  ARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQ
Query Conservation           
   
 

    
 
 
                           
      
                   
Alig confidence 





























































.....












Template Conservation          
    
 

     
 
 

      
        
             
   
.....  
          
Template Sequence  QGARVGRIDAFVQSLDNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG. . . . . CSGYRKLLKERKE
Template Known Secondary structure  S






S

SS
S
S
S
B
S.....
Template Predicted Secondary structure 


























.....
Template SS confidence 















































































   268.270.........280.........290.........300.........310.........320......... 330.........340..
 
   313......320.........330... ......340..... ....350.........360.... .....370......
Predicted Secondary structure 




.




....








...........




Query SS confidence 




















.











. . . .


















. . . . . . . . . . .











Query Sequence  RVQETIAIIRRYLPENRCLIH. KPEGAIFLWLWF. . . . KDLPITTKQLYQRLKARGV. . . . . . . . . . . LMVPGHNFFPGL
Query Conservation          
   
        . 
  
      
....         
   
   

........... 
 

  
    
Alig confidence 




















.











....


















...........











Template Conservation   
  
   
  
    
  

  
   

    
         
   
   
   



 
         
        
Template Sequence  MFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFM
Template Known Secondary structure  TT

B


TT
SS
TTTSSSSS
TT

S

S

TTTTT
Template Predicted Secondary structure 































Template SS confidence 















































































   344.....350.........360.........370.........380.........390.........400.........410.........420...
 
   377..380.........390.. .......400.........410.......
Predicted Secondary structure 










..



Query SS confidence 















. .
























Query Sequence  DKPWPHTHQCMRMNYV. . PEPEKIEAGVKILAEEIERAWAESH
Query Conservation            



  ..   
 
  

 

  

    
   
Alig confidence 















..
























Template Conservation            



     
 



 

  
  
 

  
   
Template Sequence  SHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQT
Template Known Secondary structure  TTSS

SS


TT

T
Template Predicted Secondary structure 















Template SS confidence 










































   424.....430.........440.........450.........460......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions